Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.36■□□□□ 0.85
Ubr1O70481 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.36■□□□□ 0.85
Ubr1O70481 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ubr1O70481 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr1O70481 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.35■□□□□ 0.85
Ubr1O70481 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubr1O70481 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Ubr1O70481 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr1O70481 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.34■□□□□ 0.85
Ubr1O70481 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC20.34■□□□□ 0.85
Ubr1O70481 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ubr1O70481 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.34■□□□□ 0.85
Ubr1O70481 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr1O70481 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ubr1O70481 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.34■□□□□ 0.85
Ubr1O70481 Gm27622-201ENSMUST00000183779 60 ntBASIC20.34■□□□□ 0.85
Ubr1O70481 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr1O70481 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr1O70481 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr1O70481 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr1O70481 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ubr1O70481 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Ubr1O70481 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.33■□□□□ 0.85
Ubr1O70481 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Ubr1O70481 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.33■□□□□ 0.84
Ubr1O70481 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ubr1O70481 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ubr1O70481 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.32■□□□□ 0.84
Ubr1O70481 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr1O70481 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.32■□□□□ 0.84
Ubr1O70481 Mir449b-201ENSMUST00000104833 80 ntBASIC20.32■□□□□ 0.84
Ubr1O70481 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ubr1O70481 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr1O70481 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.32■□□□□ 0.84
Ubr1O70481 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.32■□□□□ 0.84
Ubr1O70481 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr1O70481 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr1O70481 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ubr1O70481 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.32■□□□□ 0.84
Ubr1O70481 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ubr1O70481 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.32■□□□□ 0.84
Ubr1O70481 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ubr1O70481 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Gm25287-201ENSMUST00000103846 110 ntBASIC20.31■□□□□ 0.84
Ubr1O70481 Gm22918-201ENSMUST00000103855 110 ntBASIC20.31■□□□□ 0.84
Ubr1O70481 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.31■□□□□ 0.84
Ubr1O70481 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.31■□□□□ 0.84
Ubr1O70481 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ubr1O70481 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Ubr1O70481 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.31■□□□□ 0.84
Ubr1O70481 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.31■□□□□ 0.84
Ubr1O70481 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ubr1O70481 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms