Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.77□□□□□ -0.52
Rpl35aO55142 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rpl35aO55142 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Gm25745-201ENSMUST00000174945 133 ntBASIC11.77□□□□□ -0.53
Rpl35aO55142 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Gm34391-201ENSMUST00000203706 907 ntBASIC11.77□□□□□ -0.53
Rpl35aO55142 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rpl35aO55142 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rpl35aO55142 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gm11452-201ENSMUST00000122376 690 ntBASIC11.76□□□□□ -0.53
Rpl35aO55142 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.76□□□□□ -0.53
Rpl35aO55142 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.76□□□□□ -0.53
Rpl35aO55142 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.76□□□□□ -0.53
Rpl35aO55142 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rpl35aO55142 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.76□□□□□ -0.53
Rpl35aO55142 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rpl35aO55142 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rpl35aO55142 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rpl35aO55142 Gm15372-201ENSMUST00000120729 834 ntBASIC11.75□□□□□ -0.53
Rpl35aO55142 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms