Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.39■□□□□ 0.37
Prom1O54990 Gm19164-201ENSMUST00000210667 640 ntBASIC17.39■□□□□ 0.37
Prom1O54990 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Prom1O54990 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prom1O54990 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.39■□□□□ 0.37
Prom1O54990 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.38■□□□□ 0.37
Prom1O54990 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prom1O54990 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
Prom1O54990 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.38■□□□□ 0.37
Prom1O54990 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.38■□□□□ 0.37
Prom1O54990 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.38■□□□□ 0.37
Prom1O54990 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prom1O54990 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.38■□□□□ 0.37
Prom1O54990 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.38■□□□□ 0.37
Prom1O54990 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prom1O54990 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.38■□□□□ 0.37
Prom1O54990 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Prom1O54990 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Prom1O54990 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.37■□□□□ 0.37
Prom1O54990 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.37■□□□□ 0.37
Prom1O54990 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Gm18489-201ENSMUST00000172565 551 ntBASIC17.37■□□□□ 0.37
Prom1O54990 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Gm7787-201ENSMUST00000216858 688 ntBASIC17.37■□□□□ 0.37
Prom1O54990 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.37■□□□□ 0.37
Prom1O54990 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prom1O54990 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prom1O54990 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Prom1O54990 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prom1O54990 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.36■□□□□ 0.37
Prom1O54990 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Prom1O54990 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.36■□□□□ 0.37
Prom1O54990 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prom1O54990 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prom1O54990 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Prom1O54990 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Prom1O54990 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.35■□□□□ 0.37
Prom1O54990 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Prom1O54990 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms