Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf13O54965 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf13O54965 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf13O54965 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf13O54965 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf13O54965 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf13O54965 Gm7213-201ENSMUST00000215977 950 ntBASIC14.38□□□□□ -0.11
Rnf13O54965 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf13O54965 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Rnf13O54965 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf13O54965 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf13O54965 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnf13O54965 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnf13O54965 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rnf13O54965 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf13O54965 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf13O54965 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf13O54965 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf13O54965 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf13O54965 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms