Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Sptlc1O35704 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sptlc1O35704 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sptlc1O35704 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sptlc1O35704 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sptlc1O35704 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sptlc1O35704 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.29■□□□□ 0.36
Sptlc1O35704 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Mir3113-201ENSMUST00000175478 76 ntBASIC17.29■□□□□ 0.36
Sptlc1O35704 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sptlc1O35704 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sptlc1O35704 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.28■□□□□ 0.36
Sptlc1O35704 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Gm27300-201ENSMUST00000184085 97 ntBASIC17.28■□□□□ 0.36
Sptlc1O35704 Gm27335-201ENSMUST00000184758 97 ntBASIC17.28■□□□□ 0.36
Sptlc1O35704 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.28■□□□□ 0.36
Sptlc1O35704 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sptlc1O35704 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Sptlc1O35704 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.27■□□□□ 0.36
Sptlc1O35704 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.27■□□□□ 0.36
Sptlc1O35704 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
Sptlc1O35704 Mir8117-201ENSMUST00000184773 107 ntBASIC17.27■□□□□ 0.36
Sptlc1O35704 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.27■□□□□ 0.36
Sptlc1O35704 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.27■□□□□ 0.36
Sptlc1O35704 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.27■□□□□ 0.36
Sptlc1O35704 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sptlc1O35704 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sptlc1O35704 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sptlc1O35704 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sptlc1O35704 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sptlc1O35704 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Sptlc1O35704 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.26■□□□□ 0.35
Sptlc1O35704 Gm6257-201ENSMUST00000163864 910 ntBASIC17.26■□□□□ 0.35
Sptlc1O35704 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.26■□□□□ 0.35
Sptlc1O35704 Gm17872-201ENSMUST00000222550 532 ntBASIC17.26■□□□□ 0.35
Sptlc1O35704 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.26■□□□□ 0.35
Sptlc1O35704 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sptlc1O35704 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms