Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr1i3O35627 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr1i3O35627 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nr1i3O35627 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Nr1i3O35627 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 AC127302.2-201ENSMUST00000215212 268 ntBASIC17■□□□□ 0.31
Nr1i3O35627 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr1i3O35627 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17■□□□□ 0.31
Nr1i3O35627 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr1i3O35627 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nr1i3O35627 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.99■□□□□ 0.31
Nr1i3O35627 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Gm15794-201ENSMUST00000120182 631 ntBASIC16.99■□□□□ 0.31
Nr1i3O35627 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Gm25406-201ENSMUST00000157599 105 ntBASIC16.99■□□□□ 0.31
Nr1i3O35627 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.99■□□□□ 0.31
Nr1i3O35627 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nr1i3O35627 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nr1i3O35627 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nr1i3O35627 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Nr1i3O35627 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1i3O35627 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.98■□□□□ 0.31
Nr1i3O35627 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nr1i3O35627 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.97■□□□□ 0.31
Nr1i3O35627 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms