Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.14■□□□□ 0.81
Col15a1O35206 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 Mir449b-201ENSMUST00000104833 80 ntBASIC20.14■□□□□ 0.81
Col15a1O35206 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 Mir7023-201ENSMUST00000185093 64 ntBASIC20.14■□□□□ 0.81
Col15a1O35206 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Col15a1O35206 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Col15a1O35206 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.14■□□□□ 0.81
Col15a1O35206 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.14■□□□□ 0.81
Col15a1O35206 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col15a1O35206 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.13■□□□□ 0.81
Col15a1O35206 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col15a1O35206 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.13■□□□□ 0.81
Col15a1O35206 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
Col15a1O35206 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.13■□□□□ 0.81
Col15a1O35206 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.13■□□□□ 0.81
Col15a1O35206 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.13■□□□□ 0.81
Col15a1O35206 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col15a1O35206 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.13■□□□□ 0.81
Col15a1O35206 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col15a1O35206 Gm22065-201ENSMUST00000103753 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm22066-201ENSMUST00000103761 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24932-201ENSMUST00000103763 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24115-201ENSMUST00000103799 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm22190-201ENSMUST00000103827 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm22191-201ENSMUST00000103831 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24721-201ENSMUST00000103849 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm28018-201ENSMUST00000103869 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm26399-201ENSMUST00000103937 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.12■□□□□ 0.81
Col15a1O35206 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.12■□□□□ 0.81
Col15a1O35206 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25349-201ENSMUST00000177728 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm23616-201ENSMUST00000177797 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25871-201ENSMUST00000177816 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24752-201ENSMUST00000178240 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24496-201ENSMUST00000178287 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25649-201ENSMUST00000178476 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25548-201ENSMUST00000178681 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm23147-201ENSMUST00000178841 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm26095-201ENSMUST00000179270 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm22171-201ENSMUST00000179283 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm23936-201ENSMUST00000179354 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm22619-201ENSMUST00000179516 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25255-201ENSMUST00000179579 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24755-201ENSMUST00000179691 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm26506-201ENSMUST00000179692 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm25086-201ENSMUST00000179931 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm23243-201ENSMUST00000180047 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24659-201ENSMUST00000180212 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm24169-201ENSMUST00000180244 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm23689-201ENSMUST00000180354 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm27359-201ENSMUST00000184153 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm27785-201ENSMUST00000184268 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm27466-201ENSMUST00000184396 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm27703-201ENSMUST00000184836 110 ntBASIC20.12■□□□□ 0.81
Col15a1O35206 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Col15a1O35206 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.12■□□□□ 0.81
Col15a1O35206 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col15a1O35206 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.11■□□□□ 0.81
Col15a1O35206 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.11■□□□□ 0.81
Col15a1O35206 Gm2272-201ENSMUST00000194903 582 ntBASIC20.11■□□□□ 0.81
Col15a1O35206 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Col15a1O35206 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.11■□□□□ 0.81
Col15a1O35206 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col15a1O35206 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.11■□□□□ 0.81
Col15a1O35206 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col15a1O35206 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms