Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gfra3O35118 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Gfra3O35118 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.66□□□□□ -0.22
Gfra3O35118 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.66□□□□□ -0.22
Gfra3O35118 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Gm8655-201ENSMUST00000221159 852 ntBASIC13.66□□□□□ -0.22
Gfra3O35118 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Gfra3O35118 Haglr-201ENSMUST00000100000 2085 ntBASIC13.66□□□□□ -0.22
Gfra3O35118 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gfra3O35118 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.66□□□□□ -0.22
Gfra3O35118 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra3O35118 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Gfra3O35118 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Gfra3O35118 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Gfra3O35118 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.65□□□□□ -0.22
Gfra3O35118 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.65□□□□□ -0.22
Gfra3O35118 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra3O35118 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Gfra3O35118 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gfra3O35118 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Gfra3O35118 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.64□□□□□ -0.23
Gfra3O35118 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Gm25990-201ENSMUST00000102440 86 ntBASIC13.64□□□□□ -0.23
Gfra3O35118 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.64□□□□□ -0.23
Gfra3O35118 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.64□□□□□ -0.23
Gfra3O35118 Gm18733-201ENSMUST00000173950 856 ntBASIC13.64□□□□□ -0.23
Gfra3O35118 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.64□□□□□ -0.23
Gfra3O35118 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.64□□□□□ -0.23
Gfra3O35118 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.64□□□□□ -0.23
Gfra3O35118 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.64□□□□□ -0.23
Gfra3O35118 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra3O35118 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Gfra3O35118 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.63□□□□□ -0.23
Gfra3O35118 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gfra3O35118 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms