Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Hdac1O09106 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hdac1O09106 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.82■□□□□ 0.6
Hdac1O09106 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hdac1O09106 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.82■□□□□ 0.6
Hdac1O09106 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hdac1O09106 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.82■□□□□ 0.6
Hdac1O09106 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hdac1O09106 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hdac1O09106 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hdac1O09106 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hdac1O09106 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Hdac1O09106 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hdac1O09106 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Hdac1O09106 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hdac1O09106 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hdac1O09106 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hdac1O09106 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.81■□□□□ 0.6
Hdac1O09106 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hdac1O09106 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Hdac1O09106 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.8■□□□□ 0.6
Hdac1O09106 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.8■□□□□ 0.6
Hdac1O09106 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.8■□□□□ 0.6
Hdac1O09106 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hdac1O09106 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hdac1O09106 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Hdac1O09106 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.79■□□□□ 0.6
Hdac1O09106 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Hdac1O09106 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.79■□□□□ 0.6
Hdac1O09106 Gm7367-201ENSMUST00000057611 492 ntBASIC18.79■□□□□ 0.6
Hdac1O09106 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hdac1O09106 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hdac1O09106 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.79■□□□□ 0.6
Hdac1O09106 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hdac1O09106 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Hdac1O09106 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.78■□□□□ 0.6
Hdac1O09106 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hdac1O09106 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms