Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Gm4535-201ENSMUST00000182274 558 ntBASIC14.36□□□□□ -0.11
Psmb1O09061 Mir6404-201ENSMUST00000183699 94 ntBASIC14.36□□□□□ -0.11
Psmb1O09061 Gm2651-201ENSMUST00000203560 838 ntBASIC14.36□□□□□ -0.11
Psmb1O09061 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.36□□□□□ -0.11
Psmb1O09061 Gm10060-201ENSMUST00000212002 111 ntBASIC14.36□□□□□ -0.11
Psmb1O09061 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.36□□□□□ -0.11
Psmb1O09061 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 Gm10355-201ENSMUST00000097146 517 ntBASIC14.36□□□□□ -0.11
Psmb1O09061 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Psmb1O09061 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Psmb1O09061 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Psmb1O09061 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Psmb1O09061 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.35□□□□□ -0.11
Psmb1O09061 Gm7506-201ENSMUST00000207758 815 ntBASIC14.35□□□□□ -0.11
Psmb1O09061 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Psmb1O09061 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.35□□□□□ -0.11
Psmb1O09061 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Psmb1O09061 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Psmb1O09061 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Psmb1O09061 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
Psmb1O09061 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.34□□□□□ -0.11
Psmb1O09061 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Psmb1O09061 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Psmb1O09061 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Psmb1O09061 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Psmb1O09061 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.34□□□□□ -0.11
Psmb1O09061 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.34□□□□□ -0.11
Psmb1O09061 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.34□□□□□ -0.11
Psmb1O09061 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Psmb1O09061 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Psmb1O09061 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Psmb1O09061 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Psmb1O09061 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Psmb1O09061 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Psmb1O09061 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Psmb1O09061 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.33□□□□□ -0.12
Psmb1O09061 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Psmb1O09061 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Psmb1O09061 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms