Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm10553J3QPF1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm10553J3QPF1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Gm10553J3QPF1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10553J3QPF1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Gm10553J3QPF1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Gm4459-201ENSMUST00000118750 468 ntBASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Gm28659-201ENSMUST00000188013 759 ntBASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Gm9172-201ENSMUST00000212092 954 ntBASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10553J3QPF1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms