Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim34bJ3QNR8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Gm18489-201ENSMUST00000172565 551 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Mir8117-201ENSMUST00000184773 107 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Gm27397-201ENSMUST00000184997 107 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Gm9682-201ENSMUST00000197505 556 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim34bJ3QNR8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Haglr-201ENSMUST00000100000 2085 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Gm27300-201ENSMUST00000184085 97 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Gm27335-201ENSMUST00000184758 97 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim34bJ3QNR8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Gm43575-201ENSMUST00000196420 516 ntBASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim34bJ3QNR8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim34bJ3QNR8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim34bJ3QNR8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim34bJ3QNR8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim34bJ3QNR8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Gm14822-201ENSMUST00000122247 291 ntBASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Gm10175-201ENSMUST00000086013 645 ntBASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim34bJ3QNR8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim34bJ3QNR8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms