Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.03■□□□□ 0.8
ScaperF8VQ70 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.03■□□□□ 0.8
ScaperF8VQ70 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.03■□□□□ 0.8
ScaperF8VQ70 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.02■□□□□ 0.8
ScaperF8VQ70 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ScaperF8VQ70 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ScaperF8VQ70 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ScaperF8VQ70 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ScaperF8VQ70 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Mir6956-201ENSMUST00000183598 62 ntBASIC20.01■□□□□ 0.79
ScaperF8VQ70 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ScaperF8VQ70 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ScaperF8VQ70 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Gm27321-201ENSMUST00000185021 205 ntBASIC20■□□□□ 0.79
ScaperF8VQ70 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20■□□□□ 0.79
ScaperF8VQ70 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20■□□□□ 0.79
ScaperF8VQ70 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ScaperF8VQ70 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ScaperF8VQ70 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ScaperF8VQ70 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.99■□□□□ 0.79
ScaperF8VQ70 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.99■□□□□ 0.79
ScaperF8VQ70 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.99■□□□□ 0.79
ScaperF8VQ70 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ScaperF8VQ70 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.98■□□□□ 0.79
ScaperF8VQ70 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.98■□□□□ 0.79
ScaperF8VQ70 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ScaperF8VQ70 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms