Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.49□□□□□ -0.09
TprF6ZDS4 Gm45747-201ENSMUST00000212203 999 ntBASIC14.49□□□□□ -0.09
TprF6ZDS4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.49□□□□□ -0.09
TprF6ZDS4 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.49□□□□□ -0.09
TprF6ZDS4 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.49□□□□□ -0.09
TprF6ZDS4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TprF6ZDS4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TprF6ZDS4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TprF6ZDS4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TprF6ZDS4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.47□□□□□ -0.09
TprF6ZDS4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.47□□□□□ -0.09
TprF6ZDS4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Gm27301-201ENSMUST00000184012 127 ntBASIC14.47□□□□□ -0.09
TprF6ZDS4 Gm43433-201ENSMUST00000196573 481 ntBASIC14.47□□□□□ -0.09
TprF6ZDS4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.47□□□□□ -0.09
TprF6ZDS4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TprF6ZDS4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.47□□□□□ -0.09
TprF6ZDS4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.46□□□□□ -0.09
TprF6ZDS4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TprF6ZDS4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms