Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm6211-202ENSMUST00000167849 925 ntBASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Actl10-202ENSMUST00000226583 1501 ntBASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccnb1ip1D3Z3K2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccnb1ip1D3Z3K2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccnb1ip1D3Z3K2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccnb1ip1D3Z3K2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms