Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Shank1D3YZU1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm11745-201ENSMUST00000121669 448 ntBASIC14.13□□□□□ -0.15
Shank1D3YZU1 Mir7023-201ENSMUST00000185093 64 ntBASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm17271-201ENSMUST00000165535 355 ntBASIC14.13□□□□□ -0.15
Shank1D3YZU1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Mir6990-201ENSMUST00000183724 91 ntBASIC14.13□□□□□ -0.15
Shank1D3YZU1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.13□□□□□ -0.15
Shank1D3YZU1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Shank1D3YZU1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Shank1D3YZU1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm4518-201ENSMUST00000182638 718 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.12□□□□□ -0.15
Shank1D3YZU1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.12□□□□□ -0.15
Shank1D3YZU1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shank1D3YZU1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Gm18622-201ENSMUST00000219361 595 ntBASIC14.11□□□□□ -0.15
Shank1D3YZU1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shank1D3YZU1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms