Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Gm21559-201ENSMUST00000220638 855 ntBASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Gm8587-201ENSMUST00000076538 843 ntBASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Mir6404-201ENSMUST00000183699 94 ntBASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav12-1A0N8R1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Gm11355-201ENSMUST00000121120 306 ntBASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav12-1A0N8R1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12-1A0N8R1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav12-1A0N8R1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12-1A0N8R1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav12-1A0N8R1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav12-1A0N8R1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms