Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Gm36967-201ENSMUST00000193814 266 ntBASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv17A0A140T8P8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv17A0A140T8P8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv17A0A140T8P8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Gm14859-201ENSMUST00000117752 357 ntBASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Gm44430-201ENSMUST00000203376 995 ntBASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv17A0A140T8P8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gm7284-201ENSMUST00000131667 944 ntBASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gm27704-201ENSMUST00000185094 107 ntBASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv17A0A140T8P8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv17A0A140T8P8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms