Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5580A0A0N4SVP8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5580A0A0N4SVP8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm5580A0A0N4SVP8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gm5580A0A0N4SVP8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm5580A0A0N4SVP8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm5580A0A0N4SVP8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm5580A0A0N4SVP8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.26■□□□□ 0.35
Gm5580A0A0N4SVP8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 BC037039-201ENSMUST00000192003 2205 ntBASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5580A0A0N4SVP8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5580A0A0N4SVP8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms