Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm7153-201ENSMUST00000117092 455 ntBASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.81□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.8□□□□□ -0.52
Trbv13-1A0A0B4J1P8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms