Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm7638-201ENSMUST00000121348 967 ntBASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Mir5133-201ENSMUST00000174955 77 ntBASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.36□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trbv13-3A0A0B4J1H2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms