Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv5A0A0B4J1G9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.77□□□□□ -0.36
Trbv5A0A0B4J1G9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Gm12896-201ENSMUST00000118430 226 ntBASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv5A0A0B4J1G9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv5A0A0B4J1G9 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms