Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm715-201ENSMUST00000117865 831 ntBASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm11539-201ENSMUST00000119837 557 ntBASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Odf3b-204ENSMUST00000227834 930 ntBASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm29257-201ENSMUST00000186115 639 ntBASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm18421-201ENSMUST00000204122 625 ntBASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-4-dv7A0A075B6C2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms