Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.61□□□□□ -0.39
Trav17A0A075B655 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.61□□□□□ -0.39
Trav17A0A075B655 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav17A0A075B655 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.6□□□□□ -0.39
Trav17A0A075B655 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.6□□□□□ -0.39
Trav17A0A075B655 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav17A0A075B655 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.59□□□□□ -0.39
Trav17A0A075B655 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav17A0A075B655 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav17A0A075B655 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Trav17A0A075B655 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Gm715-201ENSMUST00000117865 831 ntBASIC12.58□□□□□ -0.4
Trav17A0A075B655 Gm11336-201ENSMUST00000118168 334 ntBASIC12.58□□□□□ -0.4
Trav17A0A075B655 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.58□□□□□ -0.4
Trav17A0A075B655 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.58□□□□□ -0.4
Trav17A0A075B655 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.58□□□□□ -0.4
Trav17A0A075B655 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav17A0A075B655 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms