Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-4-dv10A0A075B651 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-4-dv10A0A075B651 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-4-dv10A0A075B651 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-4-dv10A0A075B651 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms