Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav7n-4A0A075B620 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Dio3-201ENSMUST00000097228 1449 ntBASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7n-4A0A075B620 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7n-4A0A075B620 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gm13158-201ENSMUST00000122007 736 ntBASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7n-4A0A075B620 Gm45546-201ENSMUST00000211053 2394 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms