Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4n-4A0A075B615 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Gm45504-201ENSMUST00000211407 2107 ntBASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4n-4A0A075B615 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Gm15375-201ENSMUST00000119510 849 ntBASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4n-4A0A075B615 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4n-4A0A075B615 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms