Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-1A0A075B601 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trav9-1A0A075B601 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-1A0A075B601 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav9-1A0A075B601 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
Trav9-1A0A075B601 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Trav9-1A0A075B601 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Gm11355-201ENSMUST00000121120 306 ntBASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.39□□□□□ -0.43
Trav9-1A0A075B601 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav9-1A0A075B601 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-1A0A075B601 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms