Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-1A0A075B5Z8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm26039-201ENSMUST00000158152 144 ntBASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-1A0A075B5Z8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm6257-201ENSMUST00000163864 910 ntBASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-1A0A075B5Z8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-1A0A075B5Z8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-1A0A075B5Z8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms