Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc166S4R181 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc166S4R181 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc166S4R181 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc166S4R181 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc166S4R181 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.17■□□□□ 0.02
Ccdc166S4R181 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Gm8097-201ENSMUST00000117903 829 ntBASIC15.17■□□□□ 0.02
Ccdc166S4R181 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.17■□□□□ 0.02
Ccdc166S4R181 Gm5364-201ENSMUST00000216789 889 ntBASIC15.17■□□□□ 0.02
Ccdc166S4R181 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.17■□□□□ 0.02
Ccdc166S4R181 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc166S4R181 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.16■□□□□ 0.02
Ccdc166S4R181 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc166S4R181 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Gm12350-201ENSMUST00000121208 462 ntBASIC15.15■□□□□ 0.02
Ccdc166S4R181 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.15■□□□□ 0.02
Ccdc166S4R181 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc166S4R181 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc166S4R181 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc166S4R181 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms