Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Asic1-205ENSMUST00000228185 1818 ntBASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Prob1-201ENSMUST00000097619 3021 ntBASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubl3Q9Z2M6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Gm27742-201ENSMUST00000184667 60 ntBASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubl3Q9Z2M6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Gm15794-201ENSMUST00000120182 631 ntBASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubl3Q9Z2M6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms