Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gm44430-201ENSMUST00000203376 995 ntBASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Cldn13Q9Z0S4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn13Q9Z0S4 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn13Q9Z0S4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn13Q9Z0S4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn13Q9Z0S4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms