Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcb1Q9Z0H3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcb1Q9Z0H3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Gm5264-201ENSMUST00000190584 848 ntBASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcb1Q9Z0H3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gm7787-201ENSMUST00000216858 688 ntBASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarcb1Q9Z0H3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smarcb1Q9Z0H3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smarcb1Q9Z0H3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms