Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nek3Q9R0A5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm18959-201ENSMUST00000208954 655 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm21559-201ENSMUST00000220638 855 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Gm8587-201ENSMUST00000076538 843 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.34■□□□□ 0.37
Nek3Q9R0A5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nek3Q9R0A5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nek3Q9R0A5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Gm27389-201ENSMUST00000183622 195 ntBASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nek3Q9R0A5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nek3Q9R0A5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms