Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Gm44549-201ENSMUST00000208351 577 ntBASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trem1Q9JKE2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 AV356131-201ENSMUST00000206201 750 ntBASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trem1Q9JKE2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Flg-201ENSMUST00000050758 1488 ntBASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trem1Q9JKE2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Gm6211-202ENSMUST00000167849 925 ntBASIC14.24□□□□□ -0.13
Trem1Q9JKE2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms