Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Mir1938-201ENSMUST00000158746 100 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gm37748-201ENSMUST00000194379 1140 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gm18062-201ENSMUST00000208020 547 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gm18055-201ENSMUST00000208254 547 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gm45384-201ENSMUST00000210451 277 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gm6180-201ENSMUST00000065243 498 ntBASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ybx3Q9JKB3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Mir6420-201ENSMUST00000185032 102 ntBASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Gm6007-201ENSMUST00000208170 823 ntBASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ybx3Q9JKB3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm11478-201ENSMUST00000117851 599 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm24694-201ENSMUST00000180054 110 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm27663-201ENSMUST00000184839 110 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm6218-201ENSMUST00000219812 628 ntBASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ybx3Q9JKB3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gm12138-201ENSMUST00000122180 951 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gm23984-201ENSMUST00000157139 203 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gm18049-201ENSMUST00000208909 581 ntBASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ybx3Q9JKB3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Gm8515-201ENSMUST00000194852 576 ntBASIC20.52■□□□□ 0.88
Ybx3Q9JKB3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms