Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rbfox1Q9JJ43 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Gm7889-201ENSMUST00000185591 958 ntBASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rbfox1Q9JJ43 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Mir6404-201ENSMUST00000183699 94 ntBASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rbfox1Q9JJ43 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rbfox1Q9JJ43 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rbfox1Q9JJ43 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rbfox1Q9JJ43 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rbfox1Q9JJ43 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms