Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col4a3bpQ9EQG9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Gm15794-201ENSMUST00000120182 631 ntBASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Mir3081-201ENSMUST00000175305 84 ntBASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Gm27357-201ENSMUST00000183754 135 ntBASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col4a3bpQ9EQG9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Olfr129-201ENSMUST00000122318 993 ntBASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col4a3bpQ9EQG9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a3bpQ9EQG9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a3bpQ9EQG9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a3bpQ9EQG9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a3bpQ9EQG9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a3bpQ9EQG9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a3bpQ9EQG9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a3bpQ9EQG9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms