Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ap3s1Q9DCR2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Dio3-201ENSMUST00000097228 1449 ntBASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Gm13158-201ENSMUST00000122007 736 ntBASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Gm37292-201ENSMUST00000192062 758 ntBASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.16□□□□□ -0.14
Ap3s1Q9DCR2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ap3s1Q9DCR2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Ap3s1Q9DCR2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms