Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Mir770-201ENSMUST00000103252 94 ntBASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 AC122351.1-201ENSMUST00000220467 126 ntBASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4cQ9D7F7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4cQ9D7F7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gm11355-201ENSMUST00000121120 306 ntBASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gm10231-201ENSMUST00000181584 441 ntBASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Gm10175-202ENSMUST00000208752 441 ntBASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4cQ9D7F7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4cQ9D7F7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms