Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q9CYI0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.48■□□□□ 0.39
Q9CYI0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Q9CYI0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q9CYI0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.48■□□□□ 0.39
Q9CYI0 Gm8097-201ENSMUST00000117903 829 ntBASIC17.48■□□□□ 0.39
Q9CYI0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Gm11780-201ENSMUST00000136880 516 ntBASIC17.48■□□□□ 0.39
Q9CYI0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.48■□□□□ 0.39
Q9CYI0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.48■□□□□ 0.39
Q9CYI0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Q9CYI0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q9CYI0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.47■□□□□ 0.39
Q9CYI0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Q9CYI0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.47■□□□□ 0.39
Q9CYI0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.47■□□□□ 0.39
Q9CYI0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q9CYI0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
Q9CYI0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.46■□□□□ 0.39
Q9CYI0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Q9CYI0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q9CYI0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.46■□□□□ 0.39
Q9CYI0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Q9CYI0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Q9CYI0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Q9CYI0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.45■□□□□ 0.38
Q9CYI0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.45■□□□□ 0.38
Q9CYI0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.45■□□□□ 0.38
Q9CYI0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
Q9CYI0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q9CYI0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Q9CYI0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms