Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Mir1668-201ENSMUST00000184114 107 ntBASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Rubie-203ENSMUST00000227803 2430 ntBASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Gm29707-201ENSMUST00000196325 491 ntBASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssr1Q9CY50 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ssr1Q9CY50 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ssr1Q9CY50 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ssr1Q9CY50 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssr1Q9CY50 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Gm27389-201ENSMUST00000183622 195 ntBASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.19■□□□□ 0.34
Ssr1Q9CY50 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ssr1Q9CY50 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ssr1Q9CY50 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms