Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Gm2559-201ENSMUST00000201323 363 ntBASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RTRAFQ9CQE8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RTRAFQ9CQE8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Gm24841-201ENSMUST00000158676 357 ntBASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Gm27000-201ENSMUST00000182943 842 ntBASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RTRAFQ9CQE8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RTRAFQ9CQE8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms