Protein–RNA interactions for Protein: Q9CQC8

Spg21, Maspardin, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg21Q9CQC8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Gm14701-201ENSMUST00000117156 348 ntBASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spg21Q9CQC8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Spg21Q9CQC8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.52■□□□□ 0.24
Spg21Q9CQC8 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Spg21Q9CQC8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spg21Q9CQC8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spg21Q9CQC8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Spg21Q9CQC8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms