Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Trim11Q99PQ2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Gm13836-201ENSMUST00000121159 501 ntBASIC18.07■□□□□ 0.48
Trim11Q99PQ2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim11Q99PQ2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim11Q99PQ2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim11Q99PQ2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Gm15794-201ENSMUST00000120182 631 ntBASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Gm6257-201ENSMUST00000163864 910 ntBASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim11Q99PQ2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms