Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.54■□□□□ 0.08
Trim16Q99PP9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.54■□□□□ 0.08
Trim16Q99PP9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.53■□□□□ 0.08
Trim16Q99PP9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.53■□□□□ 0.08
Trim16Q99PP9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim16Q99PP9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.52■□□□□ 0.08
Trim16Q99PP9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.52■□□□□ 0.08
Trim16Q99PP9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim16Q99PP9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim16Q99PP9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim16Q99PP9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim16Q99PP9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim16Q99PP9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim16Q99PP9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim16Q99PP9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim16Q99PP9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim16Q99PP9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms