Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1b1Q99LU0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1b1Q99LU0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1b1Q99LU0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp1b1Q99LU0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Gm8258-201ENSMUST00000055593 1449 ntBASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp1b1Q99LU0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chmp1b1Q99LU0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Gm11950-201ENSMUST00000121615 838 ntBASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Gm6345-202ENSMUST00000180900 204 ntBASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Gm21362-201ENSMUST00000194272 928 ntBASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp1b1Q99LU0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp1b1Q99LU0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms