Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cstf1Q99LC2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cstf1Q99LC2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Gm44492-201ENSMUST00000197012 141 ntBASIC15.79■□□□□ 0.12
Cstf1Q99LC2 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cstf1Q99LC2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Mir1895-201ENSMUST00000122615 79 ntBASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Gm20949-201ENSMUST00000206478 952 ntBASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cstf1Q99LC2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.77■□□□□ 0.12
Cstf1Q99LC2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms