Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.16□□□□□ -0.14
Thumpd1Q99J36 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thumpd1Q99J36 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.15□□□□□ -0.14
Thumpd1Q99J36 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gm7370-201ENSMUST00000219471 767 ntBASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Thumpd1Q99J36 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Gm715-201ENSMUST00000117865 831 ntBASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Thumpd1Q99J36 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.14□□□□□ -0.15
Thumpd1Q99J36 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Thumpd1Q99J36 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms