Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.68■□□□□ 0.58
Col20a1Q923P0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.68■□□□□ 0.58
Col20a1Q923P0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col20a1Q923P0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.67■□□□□ 0.58
Col20a1Q923P0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.67■□□□□ 0.58
Col20a1Q923P0 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.67■□□□□ 0.58
Col20a1Q923P0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.67■□□□□ 0.58
Col20a1Q923P0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.67■□□□□ 0.58
Col20a1Q923P0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col20a1Q923P0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col20a1Q923P0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.65■□□□□ 0.58
Col20a1Q923P0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Gm5867-201ENSMUST00000063197 592 ntBASIC18.65■□□□□ 0.58
Col20a1Q923P0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col20a1Q923P0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col20a1Q923P0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col20a1Q923P0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Gm11594-201ENSMUST00000122313 162 ntBASIC18.64■□□□□ 0.57
Col20a1Q923P0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col20a1Q923P0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms